Showing posts with label JAK1 Inhibitor. Show all posts
Showing posts with label JAK1 Inhibitor. Show all posts

Wednesday, December 2, 2015

Momelotinib | JAK1, JAK2 Inhibitor | Janus Kinase Inhibitor | Therapy for Myelofibrosis

Momelotinib [N-(cyanomethyl)-4-[2-[[4-(4-morpholinyl)phenyl]amino]-4-pyrimidinyl]-benzamide] is a small-molecule, ATP-competitive and highly selective inhibitor for Janus Kinase 1 (JAK1, IC50 = 11 nM) and Janus Kinase 2 (JAK2, IC50 = 18 nM). Momelotinib inhibited JAK1 and JAK2 equipotently, but had an IC50 that was approximately ninefold higher for the closely related JAK3 (IC50 = 155 nM) kinase as compared with JAK2.
Momelotinib: 2D and 3D Structure

In a ‘single-point’ screening assay that assesses the degree of enzyme inhibition at a specified Momelotinib concentration (100 nM or 1 uM), only eight kinases (JAK1, JAK2, CDK2/A, ROCK2, MAPK8, TBK1, PRKD1 and PRKCN) showed less than 50% at 100 nM [1].

Summary

Common name: CYT387; CYT 387; CYT-387; CYT 11387; CYT-11387; CYT11387
Trademarks:
Molecular Formula: C23H22N6O2
CAS Registry Number: 1056634-68-4
CAS Name: N-(Cyanomethyl)-4-[2-(4-morpholinoanilino)pyrimidin-4-yl]benzamide
Molecular Weight: 414.47
SMILES:O=C(NCC#N)C1=CC=C(C2=NC(NC3=CC=C(N4CCOCC4)C=C3)=NC=C2)C=C1
InChI Key: ZVHNDZWQTBEVRY-UHFFFAOYSA-N
InChI: InChI=1S/C23H22N6O2/c24-10-12-25-22(30)18-3-1-17(2-4-18)21-9-11-26-23(28-21)27-19-5-7-20(8-6-19)29-13-15-31-16-14-29/h1-9,11H,12-16H2,(H,25,30)(H,26,27,28)
Activity: Treatment of myelofibrosis; Anti-neoplastics Drug; Anti-inflammatory Agents
Status: Phase I/II
Originator: Gilead Sciences
Momelotinib Synthesis

US8486941B2: This is first disclosed synthesis for Momelotinib. It doesn't appear to be industrially optimized.


WO2015191846: The scheme is derived from the patent.


Identifications:


1H NMR (Estimated) for Momelotinib
13C NMR (Estimated) for Momelotinib



Experimental: 13C NMR (75.5 MHz, d6-DMSO) δ 166.04, 162.34, 160.26, 159.14, 146.14, 139.87, 134.44, 132.73, 127.80, 126.84, 120.29, 117.49, 115.50, 107.51, 66.06, 49.16, 27.68.

References:
1. Pardanani, A.; et. al. CYT387, a selective JAK1/JAK2 inhibitor: in vitro assessment of kinase selectivity and preclinical studies using cell lines and primary cells from polycythemia vera patients. Leukemia 2009, 23(8), 1441-1445.
2. Brown, B. H.; et. al. N-(cyanomethyl)-4-(2-(4-morpholinophenylamino)pyrimidin-4-yl)benzamide hydrochloride salts. WO2015191846A1
3. Burns, C. J.; et. al. Phenyl amino pyrimidine compounds and uses thereof. US8486941B2

Sunday, November 1, 2015

Drugs in Clinical Pipeline: ABT-494

ABT-494 [(3S,4R)-3-ethyl-4-(3H-imidazo[1,2-a]pyrrolo[2,3-e]pyrazin-8-yl)-N-(2,2,2-trifluoroethyl)pyrrolidine-1-carboxamide] is a second generation Jak kinase inhibitor with high selectivity for Jak1 (IC50 = 0.043 uM) thereby minimizing the potential for side effects related to Jak2 (IC50 = 0.2 uM) and Jak3 (IC50 = 2.3 uM) inhibition. ABT-494 is an ATP competitive inhibitor, and is most potent against Jak1 with concentration at 50% inhibition (IC50) of about 0.045 µM when tested at 0.1 mM ATP and less than 0.003 µM at 0.001 mM ATP [1].


Moreover, ABT-494 displays good selectivity in a panel of more than 60 protein kinases that also includes Jak3. Of the kinases in the panel, 14 kinases have an IC50 below 10 µM, but only 2 non-Jak kinases have IC50's below 1 µM (Rock1 at 0.55 µM and Rock2 at 0.43 µM).

ABT-494 was engineered for increased selectivity for Jak1 using structural predictions that indicated the potential for differential binding interactions outside the ATP-binding active site of Jak1 but not Jak2. The efficacy and selectivity of ABT-494 were tested in a battery of relevant cellular and in vivo pharmacology assays including bone marrow colony formation, adjuvant induced arthritis (AIA), erythropoietin induced reticulocyte deployment and NK/NKT cell suppression [2]. 

ABT-494 demonstrates approximately 74 fold selectivity for Jak1 over Jak2 in cellular assays dependent on specific, relevant cytokines. ABT-494 is a potent inhibitor of inflammation and bone loss in rat AIA and, compared to Tofacitinib, spares relevant essential physiological processes such as erythropoietin signaling and peripheral NK cell counts at similarly efficacious doses in rats. When dosed orally for 14 days in healthy human subjects ABT-494 did not decrease reticulocyte or NK cell counts at predicted efficacious doses consistent with its pharmacodynamic properties in rats.


The activity of ABT-494 is as follows:

IC50 (JAK1 enzyme assay) = 0.043 uM
IC50 (JAK2 enzyme assay) = 0.2 uM
IC50 (JAK3 enzyme assay) = 2.3 uM
IC50 (TYK2 enzyme assay) = 4.7 uM
IC50 (ROCK1 enzyme assay) = 0.55 uM

IC50 (ROCK2 enzyme assay) = 0.43 uM


Common Name: ABT-494
Synonyms: ABT-494; ABT494; ABT 494
IUPAC Name: (3S,4R)-3-ethyl-4-(3H-imidazo[1,2-a]pyrrolo[2,3-e]pyrazin-8-yl)-N-(2,2,2-trifluoroethyl)pyrrolidine-1-carboxamide
CAS Number: 
Mechanism of Action: Kinase Inhibitor; Janus Kinase 1 Inhibitor
Indication: Anti-inflammatory Agents; Rheumatoid Arthritis Drug; Autoimmune Disease Treatment
Development Stage: Phase II

Company: AbbVie

References:
1. Voss, J. W.; et. al. Jak1 selective inhibitor and uses thereof. WO2015061665A1
2. Voss, J.; et. al. THU0127 Pharmacodynamics of A Novel JAK1 Selective Inhibitor in Rat Arthritis and Anemia Models and in Healthy Human Subjects. Ann Rheum Dis 2014, 73, 222.

Tuesday, May 5, 2015

Drugs in Clinical Pipeline: Filgotinib

Filgotinib [N-[5-[4-[(1,1-Dioxido-4-thiomorpholinyl)methyl]phenyl][1,2,4]triazolo[1,5-a]pyridin-2-yl]cyclopropanecarboxamide] is the first orally-available, selective inhibitor of Janus Kinase 1 (JAK1). Filgotinib, was shown to selectively inhibit JAK1-dependent signaling in cellular and whole blood assays (WBAs) and showed remarkable efficacy in collagen-induced arthritis (CIA) disease models for RA in both mouse and rat.

A detailed structure-activity relationship in triazolopyridine series led to the identification of Filgotinib as one of the lead compounds of the series. Characterization of Filgotinib at the biochemical level indicated a selective inhibition of JAK1 and JAK2 over JAK3 and TYK2 with a rank order potency of JAK1 ~ JAK2 greater than TYK2 and JAK3. IC50 values determined in tyrosine kinase inhibition assays correlated with Kd values determined in ligand displacement assays. It displayed a JAK1/JAK2 inhibitor profile in biochemical assays, but subsequent studies in cellular and whole blood assays revealed a selectivity of ~30-fold for JAK1- over JAK2-dependent signaling. Filgotinib dose-dependently inhibited Th1 and Th2 differentiation and to a lesser extent the differentiation of Th17 cells in vitro. Filgotinib was well exposed in rodents upon oral dosing, and exposure levels correlated with repression of Mx2 expression in leukocytes. Oral dosing of Filgotinib in a therapeutic set-up in a collagen-induced arthritis model in rodents resulted in a significant dose-dependent reduction of the disease progression. Paw swelling, bone and cartilage degradation, and levels of inflammatory cytokines were reduced by Filgotinib treatment. Efficacy of Filgotinib in the collagen-induced arthritis models was comparable to the results obtained with Etanercept [1,2].

Filgotinib is being developed by the Belgian biotech company Galápagos NV, which believes that the JAK1 selective inhibitor Filgotinib is a promising novel therapeutic with potential for oral treatment of Rheumatoid Arthritis, Crohn’s Disease and possibly other immune-inflammatory diseases. Galápagos plans to take Filgotinib into Phase 3 in rheumatoid arthritis by early 2016. Filgotinib has shown best-in-class efficacy and safety in the DARWIN Phase 2B studies in rheumatoid arthritis. In September 2015, AbbVie who was collaborating with Galápagos for Filgotinib decided to pull back, putting their efforts behind in-house JAK1 inhibitor, ABT-494. Filgotinib is now fully owned by Galapagos.


The activity of Filgotinib is as follows:

IC50 (JAK1 enzyme assay) = 10 ± 0.8 nM; Kd = 11 nM
IC50 (JAK2 enzyme assay) = 28 ± 5.4 nM; Kd = 32 nM
IC50 (JAK3 enzyme assay) = 810 ± 180 nM; Kd = 300 nM
IC50 (TYK2 enzyme assay) = 116 ± 39 nM; Kd = ND

Common Name: Filgotinib
Synonyms:  Filgotinib; GLPG0634; GLPG-0634
IUPAC Name: N-[5-[4-[(1,1-Dioxido-4-thiomorpholinyl)methyl]phenyl][1,2,4]triazolo[1,5-a]pyridin-2-yl]cyclopropanecarboxamide
CAS Number: 1206161-97-8
Mechanism of Action: Kinase Inhibitor; JAK1 Inhibitor; Janus Kinase 1 Inhibitor
Indication: Immune-inflammatory Diseases; Treatment of Rheumatoid Arthritis; Treatment of Crohn’s Disease
Development Stage: Phase II
Company: Galápagos NV


The JAKs receive continued interest as therapeutic targets for autoimmune, inflammatory, and oncological diseases. JAKs play critical roles in the development and biology of the hematopoietic system, as evidenced by mouse and human genetics. JAK1 is critical for the signal transduction of many type I and type II inflammatory cytokine receptors.

Four human JAKs have been described: JAK1, JAK2, JAK3, and TYK2. JAKs bind to the intracellular moieties of type I and type II receptors, and JAK homo- or heterodimers become activated upon ligand binding. The JAKs phosphorylate each other followed by phosphorylation of tyrosine residues on the intracellular domains of the receptors. These phosphorylated residues serve as docking sites for STAT transcription factors. JAK phosphorylation of the STAT proteins results in their nuclear translocation and provides transcriptional output for the cytokine ligands. JAKs play important roles in the functioning of the immune system. Mouse and human genetics studies linked deficiencies of JAK1 and JAK3 to severe combined immune deficiency and TYK2 to increased susceptibility to infections. AK2 serves signal transduction for inflammatory cytokines such as IFN-γ, IL-12, IL-23, and GM-CSF. Hence, JAKs have been targeted for their therapeutic potential in immune-inflammatory disorders. In fact, small-molecule JAK inhibitors proved efficacious in a range of animal disease models and have already shown promise in the clinic for organ transplant rejection, rheumatoid arthritis (RA), psoriasis, dry eye disease, myelofibrosis, inflammatory bowel disease, and asthma. Recent findings suggest that JAK1 dominates JAK1/JAK3/γc signaling, suggesting that JAK1 inhibition might be largely responsible for the in vivo efficacy of JAK inhibitors in immune-inflammatory diseases. These results indicate that a selective JAK1 inhibitor could provide an increased therapeutic window allowing for higher dosing and efficacy while avoiding dose-limited pharmacology as observed for the pan-JAK inhibitors [1].


Pre-Clinical Characterization

Characterization of Filgotinib at the biochemical level indicated a selective inhibition of JAK1 and JAK2 over JAK3 and TYK2, whereas cellular and human whole blood assays (WBAs) revealed selectivity for JAK1- over JAK2-dependent signaling in a cellular environment. Filgotinib efficiently blocks cytokine-induced signaling cascades involving JAK1 in several cell lines as well as in human primary cells. Moreover, Th1, Th2, and Th17 differentiation driven by cytokine cocktails, including JAK1-dependent cytokines such as IL-2, IL-4, and IL-6, is also inhibited by Filgotinib. These in vitro findings translate to pharmacodynamic readouts in rodents showing that JAK1 signaling is blocked in vivo as measured by a reduction of Mx2 mRNA levels. Using Tofacitinib and Baricitinib in the same assays for a comparison with Filgotinib further highlighted that Filgotinib selectively inhibits JAK1-dependent signaling in a cellular environment and is more JAK1 selective than the other two drugs.

The pharmacokinetics of Filgotinib was determined in rats and mice. Following i.v. administration, Filgotinib displayed a low to moderate plasma clearance, depending on the species tested. In mice, the total clearance represented 58% of the liver blood flow, and in rats it represented 41%. Steady-state volume of distribution ranged from ~1.7 l/kg in rats to 6 l/kg in mice, implying a significant species difference in volume of distribution. Half-life observed after oral administration was 1.7 h in mice and 3.9 h in rats. Following oral administration, the absolute bioavailability was moderate in rats (45%) and high in mice (~100%).


Furthermore, Filgotinib dose-dependently reduces inflammation, cartilage, and bone degradation in the collagen-induced arthritis (CIA) model in rats and mice [1]. In rats, doses of 1, 3, and 10 mg/kg Filgotinib reduced the clinical score to the same extent as Etanercept at endpoint. Different from the Filgotinib doses tested, the high dose of Etanercept normalized the clinical score already from the start of dosing.

Galapagos has shown that Filgotinib is actually 3 times more selective than AbbVie’s ABT-494.

References:
1. Van Rompaey, L.; et. al. Preclinical characterization of GLPG0634, a selective inhibitor of JAK1, for the treatment of inflammatory diseases. J Immunol 2013, 191(7), 3568-3577.
2. C. J.; et. al. Triazolopyridines as selective JAK1 inhibitors: from hit identification to GLPG0634. J Med Chem 2014, 57(22), 9323-9342.